Basic Information
Locus ID:
evm.TU.LG09.547
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 12784672 | 12800413 | - | evm.TU.LG09.547 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 98,526.14 Da | 43.44 | 82.10 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 712 | 875 | 8.34878E-63 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 282 | 874 | 3.1E-82 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 280 | 876 | 5.1E-109 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 270 | 508 | 1.3E-67 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 6 | 124 | 3.6E-5 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 693 | 880 | 1.2E-55 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 137 | 221 | 2.7E-6 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 282 | 877 | 56.811977 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 820 | 837 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 283 | 298 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_044506531.1 | ubiquitin carboxyl-terminal hydrolase 8 isoform X2 [Mangifera indica] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5C7IYH2 | Ubiquitin carboxyl-terminal hydrolase OS=Acer yangbiense OX=1000413 GN=EZV62_002085 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology