Basic Information
Locus ID:
evm.TU.LG09.404
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 8351679 | 8353706 | + | evm.TU.LG09.404 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 53,064.92 Da | 41.51 | 85.78 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 25 | 344 | 2.7E-76 | IPR000490 |
| Pfam | PF07983 | X8 domain | 362 | 433 | 2.3E-20 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 25 | 345 | 4.1E-81 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 357 | 453 | 1.5E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 24 | 352 | 1.5E-111 | - |
| SMART | SM00768 | X8_cls | 361 | 446 | 4.9E-50 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 259 | 272 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_031280970.1 | glucan endo-1,3-beta-glucosidase 4-like [Pistacia vera] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | V4U9I0 | glucan endo-1,3-beta-D-glucosidase OS=Citrus clementina OX=85681 GN=CICLE_v10015028mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology