Basic Information
Locus ID:
evm.TU.LG09.1785
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 40314109 | 40316168 | - | evm.TU.LG09.1785 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 56,690.55 Da | 33.94 | 79.41 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 57 | 221 | 6.5E-18 | IPR002035 |
| Pfam | PF14624 | VWA / Hh protein intein-like | 391 | 456 | 2.0E-11 | IPR032838 |
| SUPERFAMILY | SSF53300 | vWA-like | 54 | 224 | 1.02E-25 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 57 | 227 | 1.1E-34 | IPR036465 |
| SMART | SM00327 | VWA_4 | 55 | 224 | 1.0E-13 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 57 | 225 | 16.41654 | IPR002035 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| Coils | Coil | Coil | 363 | 383 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08050.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_002524155.1 | E3 ubiquitin-protein ligase WAV3 [Ricinus communis] | 0 |
| TrEMBL | A0A2P5FT01 | von Willebrand factor, type A OS=Trema orientale OX=63057 GN=TorRG33x02_031090 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology