Basic Information
Locus ID:
evm.TU.LG09.1775
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 40057865 | 40060723 | + | evm.TU.LG09.1775 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 65,888.19 Da | 38.76 | 78.19 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 475 | 490 | 2.4E-4 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 414 | 435 | 0.0016 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 363 | 377 | 0.021 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 132 | 522 | 5.49E-27 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 130 | 276 | 2.3E-12 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 438 | 549 | 1.0E-6 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 293 | 437 | 5.3E-16 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_030508726.1 | uncharacterized protein LOC115723393 [Cannabis sativa] | 0 |
| TrEMBL | A0A803Q3R6 | Protein TolB OS=Cannabis sativa OX=3483 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology