Basic Information
Locus ID:
evm.TU.LG09.150
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 5991277 | 6017282 | + | evm.TU.LG09.150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 50,840.78 Da | 50.82 | 98.88 | 0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 31 | 359 | 9.09804E-49 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 168 | 319 | 1.0E-8 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 26 | 352 | 1.44E-28 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 24 | 356 | 5.4E-25 | IPR036259 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 243 | 264 | 6.9E-8 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 66 | 87 | 6.9E-8 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 96 | 118 | 6.9E-8 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 303 | 326 | 6.9E-8 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_021753018.1 | hippocampus abundant transcript 1 protein-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A7C9EST7 | MFS domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology