HalophFGD

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Basic Information
Locus ID: evm.TU.LG09.1262
Species & Taxonomic ID: Nitraria sibirica & 357931
Genome Assembly:
Description: receptor-like protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
LG09 27857215 27860522 + evm.TU.LG09.1262
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.29 50,329.59 Da 30.57 84.17 -0.48
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14066 STKc_IRAK 99 374 5.48743E-89 -
Pfam PF00069 Protein kinase domain 98 368 2.8E-46 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 76 371 1.08E-78 IPR011009
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 73 175 4.5E-28 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 176 400 6.5E-62 -
SMART SM00220 serkin_6 93 370 3.2E-40 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 93 375 39.919376 IPR000719
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 99 124 - IPR017441
MobiDBLite mobidb-lite consensus disorder prediction 1 18 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 42 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G28940.2 Protein kinase superfamily protein. 0
RefSeq XP_031287519.1 serine/threonine-protein kinase PCRK1 [Pistacia vera] 0
Swiss-Prot Q9SF86 Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1 0
TrEMBL A0A067GBG1 Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g043568mg PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 5 jg14976, jg2777, jg32031, jg35761, jg8364
Aizoaceae Mesembryanthemum crystallinum 2 gene_14267, gene_6992
Amaranthaceae Atriplex hortensis 2 Ah028024, Ah030384
Amaranthaceae Beta vulgaris 2 BVRB_7g162090, BVRB_7g173790
Amaranthaceae Salicornia bigelovii 4 Sbi_jg1752, Sbi_jg27107, Sbi_jg33439, Sbi_jg34779
Amaranthaceae Salicornia europaea 2 Seu_jg2998, Seu_jg8118
Amaranthaceae Suaeda aralocaspica 2 GOSA_00003204, GOSA_00005778
Amaranthaceae Suaeda glauca 4 Sgl71225, Sgl73034, Sgl74795, Sgl76576
Amaranthaceae Chenopodium album 5 gene:ENSEOMG00000010174, gene:ENSEOMG00000010320 ...
gene:ENSEOMG00000039652, gene:ENSEOMG00000040733, gene:ENSEOMG00000042162
Amaranthaceae Chenopodium quinoa 5 CQ.Regalona.r1.7AG0002900, CQ.Regalona.r1.7AG0016650 ...
CQ.Regalona.r1.7BG0017880, CQ.Regalona.r1.9BG0002770, CQ.Regalona.r1.9BG0002790
Anacardiaceae Pistacia vera 2 pistato.v30170810, pistato.v30273000
Apiaceae Apium graveolens 4 Ag10G01039, Ag10G01960, Ag2G02931, Ag6G02508
Arecaceae Cocos nucifera 5 COCNU_07G010540, COCNU_07G010550, COCNU_09G008610 ...
COCNU_12G007840, scaffold004486G000060
Arecaceae Phoenix dactylifera 3 gene-LOC103696856, gene-LOC103698730, gene-LOC103698931
Asparagaceae Asparagus officinalis 3 AsparagusV1_01.694.V1.1, AsparagusV1_04.1776.V1.1 ...
AsparagusV1_08.3525.V1.1
Asteraceae Flaveria trinervia 12 Ftri10G18496, Ftri11G04489, Ftri11G29044, Ftri12G11328 ...
Ftri12G25903, Ftri12G26664, Ftri12G33439, Ftri16G28387, Ftri17G08738, Ftri17G20658, Ftri6G31417, FtriNA04448
Brassicaceae Arabidopsis thaliana 4 AT2G28940.2, AT2G39110.1, AT3G09830.1, AT5G03320.1
Brassicaceae Eutrema salsugineum 4 Thhalv10013665m.g.v1.0, Thhalv10016674m.g.v1.0 ...
Thhalv10017635m.g.v1.0, Thhalv10020792m.g.v1.0
Brassicaceae Schrenkiella parvula 4 Sp3g08160.v2.2, Sp4g11750.v2.2, Sp4g21460.v2.2 ...
Sp6g39420.v2.2
Brassicaceae Brassica nigra 7 BniB01g006030.2N, BniB01g055070.2N, BniB02g057070.2N ...
BniB05g030720.2N, BniB06g005610.2N, BniB06g018100.2N, BniB07g058030.2N
Casuarinaceae Casuarina equisetifolia 3 Ceq02G0593, Ceq08G1350, Ceq08G2167
Casuarinaceae Casuarina glauca 3 Cgl02G0607, Cgl08G1380, Cgl08G2321
Cymodoceaceae Cymodocea nodosa 4 gene.Cymno03g05290, gene.Cymno04g17910, gene.Cymno10g03120 ...
gene.Cymno14g01510
Hydrocharitaceae Thalassia testudinum 3 gene.Thate01g34100, gene.Thate08g02080, gene.Thate08g22210
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-5958
Nitrariaceae Nitraria sibirica 3 evm.TU.LG01.1466, evm.TU.LG02.1056, evm.TU.LG09.1262
Plantaginaceae Plantago ovata 3 Pov_00016178, Pov_00032743, Pov_00040302
Plumbaginaceae Limonium bicolor 3 Lb1G05277, Lb1G07113, Lb4G23123
Poaceae Echinochloa crus-galli 6 AH01.1959, AH07.3967, BH01.2246, BH07.3781, CH01.2350 ...
CH07.3840
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_2AG0125880, gene-QOZ80_2AG0150660 ...
gene-QOZ80_2BG0181660, gene-QOZ80_2BG0206090
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.1HG0038800.1, HORVU.MOREX.r3.2HG0206780.2 ...
HORVU.MOREX.r3.6HG0630070.1
Poaceae Lolium multiflorum 3 gene-QYE76_026542, gene-QYE76_059430, gene-QYE76_070220
Poaceae Oryza coarctata 4 Oco03G025490, Oco04G025980, Oco19G005000, Oco20G004910
Poaceae Oryza sativa 2 LOC_Os02g57420.1, LOC_Os10g30600.1
Poaceae Paspalum vaginatum 2 gene-BS78_01G222900, gene-BS78_04G322200
Poaceae Puccinellia tenuiflora 5 Pt_Chr0101474, Pt_Chr0502459, Pt_Chr0502470, Pt_Chr0604433 ...
Pt_Chr0604491
Poaceae Sporobolus alterniflorus 3 Chr06G013760, Chr09G026470, Chr15G000610
Poaceae Thinopyrum elongatum 3 Tel1E01G261700, Tel2E01G894200, Tel6E01G712800
Poaceae Triticum dicoccoides 6 gene_TRIDC1AG021130, gene_TRIDC1BG025630 ...
gene_TRIDC2AG073580, gene_TRIDC2BG080270, gene_TRIDC6AG058300, gene_TRIDC6BG068950
Poaceae Triticum aestivum 9 TraesCS1A02G141300.1, TraesCS1B02G157700.1 ...
TraesCS1D02G140300.1, TraesCS2A02G525300.1, TraesCS2B02G555200.1, TraesCS2D02G528200.1, TraesCS6A02G394900.1, TraesCS6B02G434800.1, TraesCS6D02G380200.1
Poaceae Zea mays 3 Zm00001eb047150_P001, Zm00001eb191260_P001 ...
Zm00001eb259080_P002
Poaceae Zoysia japonica 4 nbis-gene-21303, nbis-gene-39792, nbis-gene-48065 ...
nbis-gene-8296
Poaceae Zoysia macrostachya 3 Zma_g13309, Zma_g14723, Zma_g17431
Portulacaceae Portulaca oleracea 4 evm.TU.LG16.1138, evm.TU.LG19.870, evm.TU.LG20.1416 ...
evm.TU.LG24.866
Posidoniaceae Posidonia oceanica 3 gene.Posoc01g39370, gene.Posoc02g13180, gene.Posoc06g06570
Rhizophoraceae Bruguiera sexangula 5 evm.TU.Scaffold_11_RagTag.504, evm.TU.Scaffold_12_RagTag.245 ...
evm.TU.Scaffold_13_RagTag.834, evm.TU.Scaffold_1_RagTag.1541, evm.TU.Scaffold_4_RagTag.1604
Rhizophoraceae Carallia pectinifolia 3 nbisL1-mrna-13961, nbisL1-mrna-24556, nbisL1-mrna-5245
Rhizophoraceae Ceriops tagal 4 nbisL1-mrna-19145, nbisL1-mrna-21009, nbisL1-mrna-4749 ...
nbisL1-mrna-7334
Rhizophoraceae Ceriops zippeliana 3 nbisL1-mrna-19525, nbisL1-mrna-3918, nbisL1-mrna-4424
Rhizophoraceae Kandelia candel 5 add.evm.TU.utg000015l.190, add.evm.TU.utg000015l.191 ...
evm.TU.utg000008l.878, evm.TU.utg000016l.537, evm.TU.utg000027l.423
Rhizophoraceae Kandelia obovata 3 Maker00001506, Maker00016497, Maker00017964
Rhizophoraceae Rhizophora apiculata 5 nbisL1-mrna-1034, nbisL1-mrna-2173, nbisL1-mrna-4416 ...
nbisL1-mrna-5564, nbisL1-mrna-7709
Rhizophoraceae Rhizophora mangle 5 nbisL1-mrna-11751, nbisL1-mrna-20653, nbisL1-mrna-20946 ...
nbisL1-mrna-353, nbisL1-mrna-9566
Salicaceae Populus euphratica 4 populus_peu06244, populus_peu11673, populus_peu20081 ...
populus_peu35673
Solanaceae Lycium barbarum 3 gene-LOC132605870, gene-LOC132630030, gene-LOC132641670
Solanaceae Solanum chilense 2 SOLCI001963500, SOLCI002268400
Solanaceae Solanum pennellii 4 gene-LOC107021473, gene-LOC107027856, gene-LOC107029427 ...
gene-LOC107029543
Tamaricaceae Reaumuria soongarica 2 gene_13294, gene_5609
Tamaricaceae Tamarix chinensis 3 TC02G1903, TC11G1960, TC11G2128
Zosteraceae Zostera marina 4 Zosma01g24580.v3.1, Zosma03g11180.v3.1, Zosma05g26180.v3.1 ...
Zosma06g29290.v3.1
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