Basic Information
Locus ID:
evm.TU.LG09.1243
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 27685221 | 27687158 | - | evm.TU.LG09.1243 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 34,765.06 Da | 43.57 | 72.91 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 12 | 183 | 4.1E-73 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 3 | 107 | 5.8E-39 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 108 | 181 | 7.5E-32 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 300 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.2 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_031254973.1 | ubiquitin fusion degradation protein 1 homolog [Pistacia vera] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2I4H2S2 | ubiquitin fusion degradation protein 1 homolog isoform X2 OS=Juglans regia OX=51240 GN=LOC109013010 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology