HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: evm.TU.LG09.1143
Species & Taxonomic ID: Portulaca oleracea & 46147
Genome Assembly: GWHCBIU00000000
Description: Inactive serine threonine-protein kinase At1g67470-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr9 33313877 33315095 + evm.TU.LG09.1143
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.42 35,875.94 Da 36.13 98.72 -0.23
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07714 Protein tyrosine and serine/threonine kinase 113 303 5.1E-18 IPR001245
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 70 304 6.78E-33 IPR011009
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 116 312 4.5E-37 -
ProSiteProfiles PS50011 Protein kinase domain profile. 1 311 18.803179 IPR000719
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G35580.1 Protein kinase superfamily protein. 0
RefSeq XP_021835866.1 non-functional pseudokinase ZED1-like [Spinacia oleracea] 0
Swiss-Prot F4JZW1 Serine/threonine-protein kinase PBL13 OS=Arabidopsis thaliana OX=3702 GN=PBL13 PE=1 SV=1 0
TrEMBL A0A803LW58 Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Salicornia bigelovii 2 Sbi_jg19041, Sbi_jg37471
Amaranthaceae Salicornia europaea 1 Seu_jg5313
Amaranthaceae Suaeda aralocaspica 1 GOSA_00010072
Amaranthaceae Suaeda glauca 2 Sgl22232, Sgl27485
Portulacaceae Portulaca oleracea 1 evm.TU.LG09.1143
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.