Basic Information
Locus ID:
evm.TU.LG09.1092
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
F-box protein At5g07610-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 32870206 | 32871345 | + | evm.TU.LG09.1092 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 42,925.24 Da | 35.68 | 107.39 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 204 | 292 | 3.6E-6 | IPR013187 |
| Pfam | PF00646 | F-box domain | 5 | 43 | 9.9E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 53 | 1.06E-9 | IPR036047 |
| SMART | SM00256 | fbox_2 | 5 | 45 | 3.5E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 96 | 341 | 1.4E-26 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 49 | 8.729132 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06240.1 | F-box family protein. | 0 |
| RefSeq | XP_052184038.1 | F-box protein At3g07870-like isoform X1 [Diospyros lotus] | 0 |
| Q8GXC7 | F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9CLD5 | FBA_1 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 5 | evm.TU.LG02.886, evm.TU.LG02.887, evm.TU.LG09.1089 ... |