HalophFGD

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Basic Information
Locus ID: evm.TU.LG09.1090
Species & Taxonomic ID: Portulaca oleracea & 46147
Genome Assembly: GWHCBIU00000000
Description: F-box protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr9 32857970 32859126 + evm.TU.LG09.1090
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.90 36,072.10 Da 42.10 93.03 -0.13
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 26 65 8.1E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 18 94 1.15E-9 IPR036047
SMART SM00256 fbox_2 26 66 6.4E-6 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G65850.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_021850583.1 putative F-box protein At5g62660 [Spinacia oleracea] 0
Swiss-Prot Q9FHP3 F-box protein At5g65850 OS=Arabidopsis thaliana OX=3702 GN=At5g65850 PE=2 SV=1 0
TrEMBL A0A7C9AS89 F-box domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Portulacaceae Portulaca oleracea 5 evm.TU.LG02.886, evm.TU.LG02.887, evm.TU.LG09.1089 ...
evm.TU.LG09.1090, evm.TU.LG09.1092
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