Basic Information
Locus ID:
evm.TU.LG09.1066
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 25969194 | 25974029 | - | evm.TU.LG09.1066 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 65,810.27 Da | 35.47 | 89.50 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 407 | 589 | 2.22365E-89 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 48 | 209 | 2.47935E-93 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 45 | 212 | 1.3E-34 | IPR012001 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 452 | 577 | 6.3E-16 | IPR011766 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 242 | 355 | 2.4E-21 | IPR012000 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 231 | 384 | 3.85E-33 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 45 | 219 | 3.05E-44 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 407 | 601 | 3.4E-43 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 41 | 217 | 1.5E-61 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 400 | 591 | 2.1E-57 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 232 | 394 | 1.0E-42 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 40 | 601 | 9.6E-213 | IPR012110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 35 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_022730461.1 | pyruvate decarboxylase 2-like [Durio zibethinus] | 0 |
| Q9M040 | Pyruvate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=PDC4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7IYY0 | pyruvate decarboxylase OS=Acer yangbiense OX=1000413 GN=EZV62_003002 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology