Basic Information
Locus ID:
evm.TU.LG09.1049
Species & Taxonomic ID:
Nitraria sibirica & 357931
Short Name:
UBA1
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 25730046 | 25751989 | + | evm.TU.LG09.1049 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 252,246.16 Da | 34.13 | 83.98 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01490 | Ube1_repeat2 | 1674 | 2213 | 0.0 | - |
| CDD | cd01490 | Ube1_repeat2 | 539 | 1078 | 0.0 | - |
| CDD | cd01491 | Ube1_repeat1 | 1257 | 1642 | 2.05854E-145 | - |
| CDD | cd01491 | Ube1_repeat1 | 122 | 507 | 4.60511E-143 | - |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 369 | 438 | 3.9E-22 | IPR032420 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 1504 | 1573 | 3.5E-22 | IPR032420 |
| Pfam | PF00899 | ThiF family | 520 | 1018 | 1.0E-73 | IPR000594 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 297 | 368 | 2.7E-25 | IPR032418 |
| Pfam | PF00899 | ThiF family | 124 | 498 | 1.8E-28 | IPR000594 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 707 | 960 | 2.2E-84 | IPR019572 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 1842 | 2095 | 1.7E-83 | IPR019572 |
| Pfam | PF09358 | Ubiquitin fold domain | 2166 | 2255 | 1.5E-23 | IPR018965 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 1432 | 1503 | 4.2E-28 | IPR032418 |
| Pfam | PF00899 | ThiF family | 1259 | 1633 | 1.1E-29 | IPR000594 |
| Pfam | PF09358 | Ubiquitin fold domain | 1031 | 1119 | 3.7E-22 | IPR018965 |
| Pfam | PF00899 | ThiF family | 1655 | 2154 | 5.2E-73 | IPR000594 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 1649 | 2150 | 3.79E-129 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 116 | 504 | 8.24E-100 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 1251 | 1639 | 7.06E-101 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 514 | 1015 | 2.35E-130 | IPR035985 |
| Gene3D | G3DSA:3.40.50.720 | - | 1675 | 2153 | 2.5E-194 | - |
| Gene3D | G3DSA:3.50.50.80 | - | 1248 | 1366 | 4.5E-37 | IPR042449 |
| Gene3D | G3DSA:2.40.30.180 | - | 1420 | 1501 | 2.3E-113 | IPR042302 |
| Gene3D | G3DSA:3.50.50.80 | - | 113 | 231 | 1.1E-36 | IPR042449 |
| Gene3D | G3DSA:3.40.50.12550 | - | 1376 | 1665 | 2.3E-113 | - |
| Gene3D | G3DSA:1.10.10.2660 | - | 1827 | 2102 | 2.5E-194 | IPR042063 |
| Gene3D | G3DSA:3.40.50.12550 | - | 241 | 530 | 3.2E-112 | - |
| Gene3D | G3DSA:1.10.10.2660 | - | 692 | 967 | 4.5E-195 | IPR042063 |
| Gene3D | G3DSA:2.40.30.180 | - | 285 | 366 | 3.2E-112 | IPR042302 |
| Gene3D | G3DSA:3.10.290.60 | - | 2168 | 2258 | 3.6E-22 | IPR038252 |
| Gene3D | G3DSA:3.10.290.60 | - | 1033 | 1121 | 2.4E-20 | IPR038252 |
| Gene3D | G3DSA:3.40.50.720 | - | 540 | 1018 | 4.5E-195 | - |
| SMART | SM00985 | UBA_e1_C_a_2 | 998 | 1120 | 6.1E-50 | IPR018965 |
| SMART | SM00985 | UBA_e1_C_a_2 | 2133 | 2255 | 2.3E-53 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 117 | 1119 | 0.0 | IPR018075 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 1252 | 2260 | 0.0 | IPR018075 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 699 | 707 | - | IPR033127 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 1834 | 1842 | - | IPR033127 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 482 | 490 | - | IPR018074 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 1617 | 1625 | - | IPR018074 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 614 | 639 | 1.7E-65 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 567 | 590 | 1.7E-65 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 144 | 168 | 1.7E-65 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 259 | 286 | 1.7E-65 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 768 | 795 | 1.7E-65 | IPR000011 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1184 | 1242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1187 | 1237 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30110.1 | ubiquitin-activating enzyme 1. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling. | 0 |
| RefSeq | XP_031271882.1 | ubiquitin-activating enzyme E1 1 isoform X1 [Pistacia vera] | 0 |
| P93028 | Ubiquitin-activating enzyme E1 1 OS=Arabidopsis thaliana OX=3702 GN=UBA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7YX09 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_034399 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology