Basic Information
Locus ID:
evm.TU.LG08.979
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 12974762 | 12975501 | - | evm.TU.LG08.979 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 24,524.40 Da | 37.12 | 81.83 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 147 | 210 | 6.61738E-8 | - |
| CDD | cd17039 | Ubl_ubiquitin_like | 66 | 134 | 2.76555E-7 | - |
| Pfam | PF00240 | Ubiquitin family | 148 | 210 | 1.2E-6 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 81 | 137 | 2.1E-10 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 59 | 136 | 8.29E-12 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 139 | 210 | 1.61E-11 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 140 | 212 | 3.4E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 61 | 139 | 2.5E-10 | - |
| SMART | SM00213 | ubq_7 | 145 | 213 | 0.096 | IPR000626 |
| SMART | SM00213 | ubq_7 | 69 | 137 | 0.012 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 145 | 210 | 12.204321 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 64 | 138 | 12.901134 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 25 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Nitrariaceae | Nitraria sibirica | 9 | evm.TU.LG08.1015, evm.TU.LG08.1017, evm.TU.LG08.1021 ... |