Basic Information
Locus ID:
evm.TU.LG08.738
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
11S globulin seed storage protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 8363338 | 8366708 | + | evm.TU.LG08.738 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 40,201.88 Da | 34.27 | 92.95 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 3 | 177 | 5.25888E-58 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 212 | 367 | 3.4277E-58 | - |
| Pfam | PF00190 | Cupin | 209 | 350 | 3.4E-15 | IPR006045 |
| Pfam | PF00190 | Cupin | 14 | 162 | 1.2E-20 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 12 | 355 | 1.72E-33 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 7 | 192 | 5.2E-32 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 207 | 369 | 1.4E-39 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 3 | 163 | 9.3E-19 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 204 | 353 | 9.6E-15 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 330 | 347 | 2.2E-11 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 224 | 244 | 2.2E-11 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 271 | 287 | 2.2E-11 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 289 | 304 | 2.2E-11 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07750.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_006471098.2 | cocosin 1-like isoform X2 [Citrus sinensis] | 0 |
| Q9ZWA9 | 12S seed storage protein CRD OS=Arabidopsis thaliana OX=3702 GN=CRD PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5QKV0 | 11-S seed storage protein, plant OS=Citrus unshiu OX=55188 GN=CUMW_236950 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology