Basic Information
Locus ID:
evm.TU.LG08.591
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 6106078 | 6109178 | - | evm.TU.LG08.591 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.07 | 69,013.35 Da | 37.70 | 90.93 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 210 | 464 | 1.5E-85 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 26 | 117 | 1.0E-6 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 22 | 117 | 1.33E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 4 | 121 | 1.5E-12 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 210 | 488 | 86.243515 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 97 | 8.916987 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 625 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 546 | 570 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 524 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_007042622.2 | PREDICTED: BTB/POZ domain-containing protein NPY2 isoform X1 [Theobroma cacao] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1R3HUJ0 | BTB/POZ-like protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17077 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology