Basic Information
Locus ID:
evm.TU.LG08.590
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 6093534 | 6100486 | - | evm.TU.LG08.590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.96 | 79,225.88 Da | 41.28 | 88.47 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 294 | 550 | 1.2E-83 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 111 | 200 | 3.5E-5 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 106 | 200 | 9.42E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 89 | 204 | 4.4E-10 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 113 | 181 | 8.606758 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 294 | 574 | 84.495483 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 610 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 632 | 656 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 678 | 703 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 676 | 712 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 607 | - | - |
| Coils | Coil | Coil | 4 | 24 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_007042622.2 | PREDICTED: BTB/POZ domain-containing protein NPY2 isoform X1 [Theobroma cacao] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A061E277 | Phototropic-responsive NPH3 family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_007212 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology