Basic Information
Locus ID:
evm.TU.LG08.524
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 24634478 | 24636451 | + | evm.TU.LG08.524 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 26,442.80 Da | 35.25 | 69.01 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 18 | 233 | 2.5E-86 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 121 | 223 | 1.18E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 118 | 236 | 1.2E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 124 | 224 | 24.537094 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 79 | - | - |
| Coils | Coil | Coil | 240 | 242 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_021650935.1 | auxin-responsive protein IAA16-like isoform X1 [Hevea brasiliensis] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9VG25 | Auxin-responsive protein OS=Manihot esculenta OX=3983 GN=MANES_08G135000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology