Basic Information
Locus ID:
evm.TU.LG08.423
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
ubiquitinyl hydrolase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 20153372 | 20168451 | - | evm.TU.LG08.423 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 100,855.46 Da | 45.72 | 83.21 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 716 | 885 | 2.2882E-52 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 299 | 884 | 4.8E-81 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 297 | 886 | 4.91E-108 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 636 | 888 | 3.3E-55 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 294 | 526 | 1.9E-65 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 299 | 887 | 57.183914 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 300 | 315 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 831 | 848 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 659 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_021769581.1 | ubiquitin carboxyl-terminal hydrolase 8-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7C9EGS7 | Ubiquitin carboxyl-terminal hydrolase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology