Basic Information
Locus ID:
evm.TU.LG08.410
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 19824728 | 19828724 | - | evm.TU.LG08.410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.62 | 52,055.47 Da | 45.71 | 54.69 | -1.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 270 | 353 | 3.2E-26 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 395 | - | - |
| Coils | Coil | Coil | 285 | 315 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_021858992.1 | protein WVD2-like 4 [Spinacia oleracea] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C9DN14 | TPX2 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology