Basic Information
Locus ID:
evm.TU.LG08.388
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Endochitinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 3747168 | 3758299 | - | evm.TU.LG08.388 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 60,734.78 Da | 39.29 | 62.50 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06921 | ChtBD1_GH19_hevein | 23 | 60 | 1.01788E-17 | - |
| CDD | cd00325 | chitinase_GH19 | 309 | 536 | 1.06823E-102 | - |
| CDD | cd00325 | chitinase_GH19 | 72 | 296 | 7.35098E-107 | - |
| Pfam | PF00182 | Chitinase class I | 71 | 296 | 9.0E-119 | IPR000726 |
| Pfam | PF00182 | Chitinase class I | 309 | 536 | 1.0E-107 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 23 | 60 | 4.4E-13 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 23 | 63 | 7.59E-11 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 309 | 543 | 1.6E-96 | IPR023346 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 67 | 303 | 4.78E-101 | IPR023346 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 388 | 445 | 5.6E-110 | - |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 152 | 205 | 5.2E-113 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 21 | 63 | 6.0E-15 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 76 | 302 | 5.2E-113 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 310 | 542 | 5.6E-110 | - |
| SMART | SM00270 | ChitinBD_3 | 23 | 60 | 5.7E-16 | IPR001002 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 21 | 62 | 10.905722 | IPR001002 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 33 | 52 | - | IPR018371 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 449 | 459 | - | IPR000726 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 209 | 219 | - | IPR000726 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 87 | 109 | - | IPR000726 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_017621548.1 | PREDICTED: endochitinase 1 [Gossypium arboreum] | 0 |
| P06215 | Endochitinase OS=Phaseolus vulgaris OX=3885 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P4NAD3 | endochitinase 1 OS=Gossypium arboreum OX=29729 GN=LOC108465681 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology