Basic Information
Locus ID:
evm.TU.LG08.352
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 3335743 | 3347045 | + | evm.TU.LG08.352 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 48,280.09 Da | 35.29 | 105.24 | 0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 8 | 427 | 4.46006E-58 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 8 | 388 | 1.0E-31 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 8 | 424 | 3.66E-37 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 4 | 429 | 3.9E-41 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 4 | 437 | 11.696512 | IPR020846 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 222 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_006422528.1 | hippocampus abundant transcript-like protein 1 [Citrus clementina] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A1Q3DE80 | MFS_1 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34188 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology