Basic Information
Locus ID:
evm.TU.LG08.209
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
SH3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 1859151 | 1863192 | - | evm.TU.LG08.209 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 41,139.91 Da | 35.92 | 77.05 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 308 | 356 | 5.2E-11 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 49 | 258 | 3.35E-23 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 262 | 358 | 1.44E-16 | IPR036028 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 306 | 358 | 4.5E-16 | - |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 48 | 267 | 1.4E-11 | IPR027267 |
| SMART | SM00326 | SH3_2 | 304 | 359 | 9.6E-13 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 301 | 360 | 19.575687 | IPR001452 |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 149 | 169 | - | - |
| Coils | Coil | Coil | 186 | 213 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_006487313.2 | SH3 domain-containing protein 2 [Citrus sinensis] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7I7R0 | SH3 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_011636 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology