halophFGD

Basic Information

Locus ID: evm.TU.LG08.150

Species & Taxonomic ID: Portulaca oleracea & 46147

Genome Assembly: GWHCBIU00000000

Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8	8405229	8406276	-	evm.TU.LG08.150

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.92	27,033.88 Da	37.99	103.90	-0.08

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00560	Leucine Rich Repeat	48	66	1.3	IPR001611
Pfam	PF00560	Leucine Rich Repeat	212	230	0.23	IPR001611
SUPERFAMILY	SSF52058	L domain-like	29	226	3.06E-41	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	10	235	2.1E-55	IPR032675
ProSiteProfiles	PS51450	Leucine-rich repeat profile.	212	234	7.065096	IPR001611

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description	E-value
TrEMBL	A0A1D1XMU4	Receptor protein kinase CLAVATA1 (Fragment) OS=Anthurium amnicola OX=1678845 GN=CLV1_1 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Casuarinaceae	Casuarina equisetifolia	1	Ceq03G0970
Poaceae	Sporobolus alterniflorus	5	Chr02G006220, Chr04G029410, Chr05G028420, Chr11G005910 ... Chr18G000820
Portulacaceae	Portulaca oleracea	1	evm.TU.LG08.150