Basic Information
Locus ID:
evm.TU.LG08.1134
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 37138992 | 37151728 | - | evm.TU.LG08.1134 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 202,501.13 Da | 49.03 | 82.86 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1478 | 1891 | 1.16057E-122 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1525 | 1896 | 4.9E-82 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1471 | 1889 | 5.1E-95 | IPR035983 |
| SUPERFAMILY | SSF48371 | ARM repeat | 194 | 663 | 7.4E-41 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 184 | 502 | 3.7E-51 | IPR011989 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1769 | 1894 | 8.7E-32 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1420 | 1659 | 1.8E-45 | - |
| SMART | SM00185 | arm_5 | 309 | 349 | 73.0 | IPR000225 |
| SMART | SM00119 | hect_3 | 1489 | 1896 | 7.1E-84 | IPR000569 |
| SMART | SM00185 | arm_5 | 226 | 267 | 94.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 352 | 390 | 8.3 | IPR000225 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1502 | 1896 | 56.211342 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 973 | 1180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1144 | 1180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 667 | 720 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1058 | 1082 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 974 | 1026 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1083 | 1120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 720 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1290 | 1315 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_021860892.1 | E3 ubiquitin-protein ligase UPL3 [Spinacia oleracea] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R9A0 | HECT-type E3 ubiquitin transferase OS=Spinacia oleracea OX=3562 GN=SOVF_097120 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology