Basic Information
Locus ID:
evm.TU.LG08.1054
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 14754959 | 14755969 | - | evm.TU.LG08.1054 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.73 | 7,150.97 Da | 46.02 | 68.03 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51690.5 | - | 0 |
| RefSeq | XP_006450809.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X3 [Citrus clementina] | 0 |
| Q39247 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana OX=3702 GN=PP2AB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HWJ6 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Acer yangbiense OX=1000413 GN=EZV62_012547 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg2666, Sbi_jg61471, Sbi_jg61473 |
| Apiaceae | Apium graveolens | 2 | Ag3G02863, Ag6G01409 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.306.V1.1, AsparagusV1_Unassigned.1123.V1.1 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG08.1054 |