Basic Information
Locus ID:
evm.TU.LG07.970
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 10758346 | 10761280 | - | evm.TU.LG07.970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 38,392.18 Da | 50.47 | 71.14 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 73 | 350 | 7.2E-83 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 238 | 340 | 1.52E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 235 | 353 | 3.8E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 240 | 341 | 26.22884 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 195 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_010683059.2 | auxin-responsive protein IAA9 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q38826 | Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9DPQ0 | Auxin-responsive protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology