Basic Information
Locus ID:
evm.TU.LG07.87
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 717866 | 724897 | + | evm.TU.LG07.87 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 162,588.38 Da | 40.00 | 98.33 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 114 | 167 | 1.35847E-8 | IPR018392 |
| CDD | cd00118 | LysM | 186 | 228 | 6.34082E-7 | IPR018392 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 1195 | 1229 | 0.28 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 538 | 575 | 1.3 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 912 | 934 | 3.6E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 257 | 276 | 0.022 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 980 | 1018 | 5.4E-7 | IPR001611 |
| Pfam | PF01476 | LysM domain | 186 | 229 | 7.5E-7 | IPR018392 |
| Pfam | PF01476 | LysM domain | 115 | 168 | 1.6E-9 | IPR018392 |
| Pfam | PF13855 | Leucine rich repeat | 303 | 361 | 3.4E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 918 | 1304 | 9.52E-51 | - |
| SUPERFAMILY | SSF54106 | LysM domain | 185 | 229 | 7.59E-6 | IPR036779 |
| SUPERFAMILY | SSF52058 | L domain-like | 267 | 651 | 1.7E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 728 | 792 | 4.83E-11 | IPR011009 |
| SUPERFAMILY | SSF54106 | LysM domain | 114 | 169 | 2.88E-5 | IPR036779 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 538 | 663 | 7.2E-32 | IPR032675 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 112 | 177 | 8.0E-12 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 705 | 804 | 2.0E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1195 | 1322 | 2.2E-28 | IPR032675 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 178 | 234 | 2.1E-9 | IPR036779 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 901 | 1194 | 2.0E-70 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 247 | 536 | 2.2E-63 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1375 | 1476 | 7.9E-7 | - |
| SMART | SM00369 | LRR_typ_2 | 399 | 422 | 5.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 601 | 625 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1057 | 1080 | 6.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 983 | 1006 | 3.1E-4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 325 | 348 | 0.0014 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 960 | 982 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 302 | 324 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1260 | 1284 | 9.3 | IPR003591 |
| SMART | SM00257 | LysM_2 | 114 | 168 | 3.1E-7 | IPR018392 |
| SMART | SM00257 | LysM_2 | 185 | 229 | 5.8E-7 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 113 | 167 | 11.108401 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 184 | 228 | 12.341809 | IPR018392 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1322 | 1344 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021749180.1 | receptor-like kinase TMK4 [Chenopodium quinoa] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LZJ6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology