Basic Information
Locus ID:
evm.TU.LG07.626
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Organic cation carnitine transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 20626400 | 20632652 | + | evm.TU.LG07.626 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 52,260.54 Da | 36.44 | 119.05 | 0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00083 | Sugar (and other) transporter | 339 | 473 | 2.0E-9 | IPR005828 |
| Pfam | PF00083 | Sugar (and other) transporter | 57 | 226 | 2.8E-26 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 10 | 474 | 4.84E-61 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 19 | 476 | 1.4E-74 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 26 | 468 | 38.324173 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 344 | 361 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_044463100.1 | organic cation/carnitine transporter 7-like [Mangifera indica] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HWI6 | MFS domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_012537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology