Basic Information
Locus ID:
evm.TU.LG07.602
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Translocase of chloroplast 90
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 20340230 | 20349577 | - | evm.TU.LG07.602 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.44 | 112,418.11 Da | 44.46 | 86.34 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04062 | ARP2/3 complex ARPC3 (21 kDa) subunit | 2 | 163 | 1.0E-52 | IPR007204 |
| Pfam | PF04548 | AIG1 family | 386 | 515 | 3.5E-22 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 729 | 992 | 4.1E-116 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 378 | 522 | 2.03E-18 | IPR027417 |
| SUPERFAMILY | SSF69060 | Arp2/3 complex 21 kDa subunit ARPC3 | 2 | 163 | 2.62E-54 | IPR036753 |
| Gene3D | G3DSA:1.10.1760.10 | - | 1 | 169 | 3.2E-56 | IPR036753 |
| Gene3D | G3DSA:3.40.50.300 | - | 362 | 608 | 8.2E-48 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 275 | 999 | 9.1E-207 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 382 | 613 | 25.614344 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 305 | - | - |
| Coils | Coil | Coil | 120 | 140 | - | - |
| Coils | Coil | Coil | 696 | 716 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_031250482.1 | translocase of chloroplast 90, chloroplastic [Pistacia vera] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7I0H0 | AIG1-type G domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_013255 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology