Basic Information
Locus ID:
evm.TU.LG07.578
Species & Taxonomic ID:
Nitraria sibirica & 357931
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 19975111 | 19978140 | - | evm.TU.LG07.578 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 74,317.57 Da | 35.09 | 81.73 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 13 | 53 | 2.4E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 373 | 571 | 1.5E-26 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 177 | 198 | 0.33 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 105 | 165 | 2.9E-10 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 199 | 1.09E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 373 | 643 | 8.11E-45 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 14 | 126 | 1.5E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 666 | 7.8E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 127 | 218 | 4.4E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 335 | 445 | 9.8E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 656 | 25.601633 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 343 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_007014565.1 | PREDICTED: pollen receptor-like kinase 2 [Theobroma cacao] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A061GYI9 | Leucine-rich repeat protein kinase family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_039777 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology