Basic Information
Locus ID:
evm.TU.LG07.45
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Small ubiquitinrelated modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 439966 | 440465 | - | evm.TU.LG07.45 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 11,655.96 Da | 50.49 | 56.60 | -0.94 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01763 | Ubl_SUMO_like | 24 | 94 | 7.26859E-18 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 32 | 93 | 4.2E-7 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 17 | 100 | 6.98E-13 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 1.7E-20 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26840.1 | small ubiquitin-like modifier 1. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. | 0 |
| RefSeq | XP_022846023.1 | small ubiquitin-related modifier 1-like isoform X1 [Olea europaea var. sylvestris] | 0 |
| P55852 | Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1J4KBW1 | Small ubiquitin-related modifier 2 OS=Tritrichomonas foetus OX=1144522 GN=SUMO2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology