Basic Information
Locus ID:
evm.TU.LG07.434
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 4163584 | 4168013 | - | evm.TU.LG07.434 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 43,784.28 Da | 43.34 | 104.58 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 75 | 339 | 1.7E-86 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 99 | 338 | 1.94E-38 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 102 | 400 | 5.5E-88 | IPR027417 |
| SMART | SM00382 | AAA_5 | 125 | 299 | 0.0017 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 71 | 392 | 6.3E-98 | IPR013765 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 272 | 344 | 17.719198 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 103 | 262 | 29.311247 | IPR020588 |
| PRINTS | PR00142 | RecA protein signature | 233 | 262 | 5.2E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 195 | 224 | 5.2E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 315 | 344 | 5.2E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 281 | 309 | 5.2E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 161 | 190 | 5.2E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 368 | 385 | 5.2E-58 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_021741071.1 | DNA repair protein recA homolog 2, mitochondrial-like isoform X2 [Chenopodium quinoa] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MAJ9 | RECA_2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology