Basic Information
Locus ID:
evm.TU.LG07.366
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 15219445 | 15223598 | + | evm.TU.LG07.366 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 71,050.53 Da | 40.31 | 97.82 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 1.2E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 119 | 179 | 4.8E-12 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 301 | 567 | 5.4E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 568 | 2.83E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 219 | 4.25E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 210 | 4.5E-55 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 375 | 584 | 1.4E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 374 | 6.0E-34 | - |
| SMART | SM00220 | serkin_6 | 298 | 567 | 5.6E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 298 | 583 | 35.396496 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 304 | 326 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 417 | 429 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 166 | 179 | 1.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 121 | 134 | 1.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006453537.1 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 isoform X2 [Citrus clementina] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | V4UKU6 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10007718mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology