Basic Information
Locus ID:
evm.TU.LG07.2115
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 47449061 | 47451538 | - | evm.TU.LG07.2115 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 90,289.44 Da | 40.07 | 107.60 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 659 | 719 | 4.5E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 73 | 2.0E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 259 | 319 | 3.2E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 236 | 254 | 0.67 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 521 | 580 | 3.1E-8 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 335 | 722 | 7.22E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 372 | 3.3E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 498 | 756 | 6.3E-75 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 328 | 496 | 2.0E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 175 | 274 | 4.3E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 174 | 1.2E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 275 | 327 | 5.2E-11 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 186 | 209 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 706 | 732 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 138 | 162 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 567 | 591 | 9.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 543 | 566 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 658 | 682 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 519 | 542 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 282 | 306 | 69.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 306 | 326 | 12.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 567 | 593 | 62.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 519 | 548 | 450.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 234 | 263 | 300.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 186 | 212 | 730.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 682 | 708 | 34.0 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 545 | 568 | 7.026593 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 521 | 543 | 7.165205 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 237 | 250 | 6.5E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 706 | 719 | 6.5E-6 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04220.1 | receptor like protein 46. | 0 |
| RefSeq | XP_021741316.1 | leucine-rich repeat receptor protein kinase MSP1-like [Chenopodium quinoa] | 0 |
| F4JGB6 | Receptor-like protein 46 OS=Arabidopsis thaliana OX=3702 GN=RLP46 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803MM93 | LRRNT_2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_18890 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah021381 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g056200 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000032386 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.3BG0017740 |
| Anacardiaceae | Pistacia vera | 6 | pistato.v30085600, pistato.v30085610, pistato.v30085720 ... |
| Apiaceae | Apium graveolens | 5 | Ag1G01409, Ag1G01533, Ag1G01534, Ag3G00393, Ag9G01364 |
| Arecaceae | Cocos nucifera | 1 | scaffold001583G000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103718375 |
| Asteraceae | Flaveria trinervia | 2 | Ftri16G03062, Ftri16G18592 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G04220.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10027707m.g.v1.0, Thhalv10027711m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g02900.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB04g018820.2N, BniB04g018840.2N, BniB07g033940.2N |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.2115, evm.TU.LG15.1016 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_8_RagTag.19 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-10341 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-20621 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17663 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000018l.391 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00002965 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-24363 |
| Salicaceae | Populus euphratica | 1 | populus_peu04482 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132607114 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_8519 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1643 |