Basic Information
Locus ID:
evm.TU.LG07.207
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 9633247 | 9636836 | - | evm.TU.LG07.207 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 83,701.85 Da | 42.62 | 88.29 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 361 | 659 | 4.18119E-147 | - |
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 46 | 344 | 1.05304E-150 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 366 | 655 | 5.0E-28 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 82 | 338 | 1.5E-5 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 360 | 660 | 1.33E-47 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 46 | 344 | 1.6E-33 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 359 | 661 | 6.0E-52 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 44 | 345 | 1.5E-28 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 46 | 345 | 25.202419 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 361 | 660 | 32.080143 | IPR030395 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 716 | 745 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 722 | 745 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58050.1 | SHV3-like 4. | 0 |
| RefSeq | XP_031266324.1 | glycerophosphodiester phosphodiesterase GDPDL7-like [Pistacia vera] | 0 |
| Q9FGT9 | Glycerophosphodiester phosphodiesterase GDPDL6 OS=Arabidopsis thaliana OX=3702 GN=GDPDL6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HV34 | glycerophosphodiester phosphodiesterase OS=Acer yangbiense OX=1000413 GN=EZV62_012143 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology