Basic Information
Locus ID:
evm.TU.LG07.179
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Protein of unknown function (DUF3537)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 1521980 | 1532523 | + | evm.TU.LG07.179 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 70,974.13 Da | 35.48 | 99.30 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06661 | GGCT_like | 409 | 511 | 2.98237E-8 | IPR013024 |
| Pfam | PF12056 | Protein of unknown function (DUF3537) | 3 | 381 | 2.0E-143 | IPR021924 |
| Pfam | PF04752 | ChaC-like protein | 408 | 584 | 8.2E-44 | IPR006840 |
| Gene3D | G3DSA:3.10.490.10 | - | 399 | 592 | 6.1E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 328 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21080.1 | 0 | |
| RefSeq | XP_010669538.2 | uncharacterized protein LOC104886749 [Beta vulgaris subsp. vulgaris] | 0 |
| Q84MC1 | Gamma-glutamylcyclotransferase 2-2 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803NCK4 | ABC transmembrane type-1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_13058 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034276 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g035300 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg20592, Sbi_jg23164 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg17013 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00009176 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl63460, Sgl67939, Sgl67959 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000018858, gene:ENSEOMG00000019537 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0012990, CQ.Regalona.r1.2BG0014880 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30252350 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G019830 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103712264 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G21080.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10000266m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g00220.v2.2 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G2152 |
| Casuarinaceae | Casuarina glauca | 1 | CglSG0058 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.1636 |
| Poaceae | Echinochloa crus-galli | 3 | AH08.2070, BH08.2175, CH08.2348 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0637280, gene-QOZ80_8BG0665810 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0681160.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_030042 |
| Poaceae | Oryza coarctata | 2 | Oco15G010630, Oco16G011930 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g41000.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_07G189700 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0403757, Pt_Chr0403783 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr20G001820, Chr29G002150 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G443400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG032220, gene_TRIDC7BG022100 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G251100.1, TraesCS7B02G140000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb174560_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-17444 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g24373 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.179, evm.TU.LG15.52 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g26170 |
| Salicaceae | Populus euphratica | 2 | populus_peu04555, populus_peu13113 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_16783 |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G1848 |