Basic Information
Locus ID:
evm.TU.LG07.1646
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 31290837 | 31293807 | - | evm.TU.LG07.1646 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.94 | 87,106.52 Da | 51.59 | 80.24 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 18 | 174 | 3.072E-61 | - |
| Pfam | PF00069 | Protein kinase domain | 473 | 725 | 5.9E-40 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 19 | 153 | 3.3E-7 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 20 | 171 | 1.09E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 455 | 731 | 3.28E-67 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 545 | 748 | 1.6E-47 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 19 | 171 | 1.6E-8 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 450 | 544 | 3.2E-25 | - |
| SMART | SM00220 | serkin_6 | 472 | 732 | 1.3E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 472 | 735 | 35.283424 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 590 | 602 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 756 | 782 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 782 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 338 | - | - |
| Coils | Coil | Coil | 398 | 450 | - | - |
| Coils | Coil | Coil | 338 | 358 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_024033174.1 | U-box domain-containing protein 52 isoform X2 [Citrus clementina] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7I088 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_013772 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology