Basic Information
Locus ID:
evm.TU.LG07.1528
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 33739300 | 33750089 | + | evm.TU.LG07.1528 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 57,203.71 Da | 57.07 | 85.64 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 259 | 307 | 1.08854E-14 | - |
| Pfam | PF12906 | RING-variant domain | 259 | 306 | 1.9E-10 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 255 | 310 | 8.83E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 253 | 311 | 7.0E-15 | IPR013083 |
| SMART | SM00744 | ringv_2 | 258 | 307 | 1.9E-18 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 251 | 313 | 18.270115 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 138 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60580.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021864068.1 | uncharacterized protein LOC110802925 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9QGW0 | RING-CH-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_180040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology