Basic Information
Locus ID:
evm.TU.LG07.1519
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 30137663 | 30146697 | + | evm.TU.LG07.1519 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 100,655.20 Da | 48.94 | 56.18 | -1.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 646 | 690 | 2.34307E-4 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 54 | 260 | 7.68E-6 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 643 | 683 | 2.56E-8 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 644 | 695 | 2.6E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 537 | 639 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 522 | 536 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 639 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 780 | 806 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 880 | 909 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 821 | 839 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 758 | 779 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 846 | 879 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 730 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 929 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 757 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_031279565.1 | nucleolar protein dao-5 [Pistacia vera] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J5TRK6 | Tudor domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS8047 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology