Basic Information
Locus ID:
evm.TU.LG07.1507
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the glycosyl hydrolase 18 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 29982526 | 29987997 | + | evm.TU.LG07.1507 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.64 | 45,478.83 Da | 37.22 | 80.54 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 61 | 397 | 2.68853E-136 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 66 | 391 | 9.8E-75 | IPR001223 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 66 | 394 | 3.55E-69 | IPR017853 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 297 | 362 | 5.37E-14 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 78 | 392 | 5.5E-102 | - |
| Gene3D | G3DSA:3.10.50.10 | - | 296 | 362 | 5.5E-102 | IPR029070 |
| SMART | SM00636 | 2g34 | 63 | 391 | 1.1E-100 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 63 | 407 | 69.250198 | IPR001223 |
| ProSitePatterns | PS01095 | Glycosyl hydrolases family 18 (GH18) active site signature. | 168 | 176 | - | IPR001579 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19820.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_004291945.1 | PREDICTED: chitotriosidase-1-like [Fragaria vesca subsp. vesca] | 0 |
| A0A072VEP0 | Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5XUG1 | chitinase-like protein 3 OS=Durio zibethinus OX=66656 GN=LOC111286091 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology