Basic Information
Locus ID:
evm.TU.LG07.1272
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 24463175 | 24472402 | - | evm.TU.LG07.1272 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 97,678.15 Da | 44.03 | 67.26 | -0.87 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 32 | 259 | 4.87E-8 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 646 | 699 | 4.7E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 647 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 705 | 908 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 804 | 830 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 467 | 483 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 705 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 546 | 569 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 834 | 884 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 281 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 570 | 630 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 762 | 803 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 498 | 545 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.1 | 0 | |
| RefSeq | XP_021769435.1 | ABC transporter F family member 4-like [Chenopodium quinoa] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9AN04 | Tudor domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology