Basic Information
Locus ID:
evm.TU.LG07.1179
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 19417910 | 19420170 | + | evm.TU.LG07.1179 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 12,350.69 Da | 50.15 | 70.36 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_017610894.1 | PREDICTED: BTB/POZ domain-containing protein At1g30440 isoform X1 [Gossypium arboreum] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag6G02427 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11944 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G868800 |
| Poaceae | Triticum aestivum | 1 | TraesCS7D02G264400.1.cds1 |
| Poaceae | Zea mays | 3 | Zm00001eb305650_P001, Zm00001eb310110_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-20334 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.1179, evm.TU.LG16.1056 |
| Posidoniaceae | Posidonia oceanica | 5 | gene.Posoc01g03430, gene.Posoc02g28470, gene.Posoc05g05550 ... |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_11_RagTag.548 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-5859 |
| Salicaceae | Populus euphratica | 2 | populus_peu04681, populus_peu37962 |