Basic Information
Locus ID:
evm.TU.LG07.1169
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
acetyltransferase component of pyruvate dehydrogenase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 18747579 | 18750852 | - | evm.TU.LG07.1169 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.61 | 26,773.29 Da | 64.69 | 90.28 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06849 | lipoyl_domain | 49 | 121 | 1.94247E-29 | - |
| Pfam | PF00364 | Biotin-requiring enzyme | 49 | 119 | 1.5E-15 | IPR000089 |
| SUPERFAMILY | SSF51230 | Single hybrid motif | 46 | 138 | 7.07E-25 | IPR011053 |
| Gene3D | G3DSA:2.40.50.100 | - | 42 | 148 | 8.7E-27 | - |
| ProSiteProfiles | PS50968 | Biotinyl/lipoyl domain profile. | 47 | 122 | 26.14245 | IPR000089 |
| ProSitePatterns | PS00189 | 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. | 72 | 101 | - | IPR003016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 151 | - | - |
| Coils | Coil | Coil | 121 | 141 | - | - |
KEGG Pathway
Pathway:
ko00010 (Glycolysis / Gluconeogenesis)
map00010 (Glycolysis / Gluconeogenesis)
ko00020 (Citrate cycle (TCA cycle))
map00020 (Citrate cycle (TCA cycle))
ko00620 (Pyruvate metabolism)
map00620 (Pyruvate metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25860.1 | 2-oxoacid dehydrogenases acyltransferase family protein. Nuclear encoded dihydrolipoamide S-acetyltransferase (LTA2) that encodes teh Pyruvate Decarboxylase E2 subunit. Mutant has embryo defect. | 0 |
| RefSeq | XP_010681572.2 | dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SQI8 | Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LTA2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RR30 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Spinacia oleracea OX=3562 GN=SOVF_044070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000013134 |
| Arecaceae | Cocos nucifera | 2 | COCNU_03G001150, COCNU_14G007100 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_01.1284.V1.1, AsparagusV1_05.1496.V1.1 ... |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g01930 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G01234, Lb2G15417 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr07G017130 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5BG020310 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG07.1169 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26499 |