Basic Information
Locus ID:
evm.TU.LG07.1097
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
proteinaceous RNase P 1, chloroplastic mitochondrial-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 26341362 | 26344523 | - | evm.TU.LG07.1097 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.41 | 91,897.07 Da | 38.99 | 71.41 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 496 | 720 | 3.8E-72 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 306 | 454 | 2.0E-52 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 179 | 239 | 8.1E-16 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 512 | 686 | 1.8E-194 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 305 | 723 | 1.8E-194 | IPR011990 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 369 | 400 | 6.9E-4 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 366 | 400 | 9.755614 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 725 | 755 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 725 | 739 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 143 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_006451186.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial isoform X1 [Citrus clementina] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HZ11 | ribonuclease P OS=Acer yangbiense OX=1000413 GN=EZV62_012765 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology