Basic Information
Locus ID:
evm.TU.LG07.1016
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
FBD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 11639252 | 11641129 | - | evm.TU.LG07.1016 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 40,904.22 Da | 41.37 | 84.43 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 40 | 220 | 6.43E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 15 | 333 | 1.3E-10 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 259 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048499304.1 | putative F-box/LRR-repeat protein At4g15060 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0K9R5S3 | FBD domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_103490 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 8 | gene_11925, gene_1351, gene_1901, gene_1902, gene_23215 ... |
| Amaranthaceae | Atriplex hortensis | 1 | Ah014650 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g041540 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg11163, Sbi_jg46136, Sbi_jg46137, Sbi_jg46138 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg20478, Seu_jg20479 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00002378, GOSA_00005474 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl35396, Sgl40771, Sgl55731, Sgl60945 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8BG0009890 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.1016, evm.TU.LG15.934 |