Basic Information
Locus ID:
evm.TU.LG07.1
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 1487 | 3061 | + | evm.TU.LG07.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 56,325.40 Da | 39.34 | 95.08 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 43 | 65 | 8.0E-5 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 255 | 293 | 4.2E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 92 | 149 | 4.0E-10 | IPR001611 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 321 | 359 | 1.6E-6 | IPR025875 |
| SUPERFAMILY | SSF52047 | RNI-like | 56 | 365 | 1.8E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 465 | 518 | 1.02E-9 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 254 | 6.2E-50 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 255 | 382 | 1.8E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 447 | 524 | 1.0E-13 | - |
| SMART | SM00369 | LRR_typ_2 | 114 | 137 | 8.6E-4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 320 | 344 | 9.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 188 | 212 | 390.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 485 | 524 | 8.640834 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 491 | 513 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_048496023.1 | receptor-like kinase TMK4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LZH6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology