Basic Information
Locus ID:
evm.TU.LG06.994
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 28045395 | 28058753 | - | evm.TU.LG06.994 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 87,500.58 Da | 48.88 | 92.19 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 522 | 793 | 9.4E-41 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 170 | 230 | 3.1E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 58 | 97 | 2.2E-4 | IPR013210 |
| SUPERFAMILY | SSF101447 | Formin homology 2 domain (FH2 domain) | 462 | 477 | 4.18E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 497 | 793 | 3.42E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 57 | 265 | 4.25E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 597 | 801 | 4.2E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 482 | 596 | 1.6E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 57 | 280 | 6.5E-47 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 147 | 169 | 7.319219 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 519 | 797 | 34.336445 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 340 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_048492763.1 | protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9D3V8 | Receptor protein serine/threonine kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology