Basic Information
Locus ID:
evm.TU.LG06.862
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
E3 ubiquitin ligase BIG
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 8533875 | 8539987 | + | evm.TU.LG06.862 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.05 | 57,198.93 Da | 63.96 | 60.72 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 466 | 509 | 1.3E-9 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 458 | 510 | 4.5E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 465 | 512 | 3.7E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 468 | 509 | 5.6E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 468 | 509 | 11.81064 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 440 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 78 | - | - |
| Coils | Coil | Coil | 101 | 121 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47180.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_024039613.1 | E3 ubiquitin ligase BIG BROTHER-related [Citrus clementina] | 0 |
| Q8L649 | E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE=1 SV=1 | 0 | |
| TrEMBL | A0A067GLN7 | RING-type domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g044318mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for evm.TU.LG06.862.