Basic Information
Locus ID:
evm.TU.LG06.756
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Something about silencing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 17481627 | 17485450 | + | evm.TU.LG06.756 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.81 | 15,569.56 Da | 45.63 | 93.26 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 138 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43650.1 | Sas10/U3 ribonucleoprotein (Utp) family protein. | 0 |
| RefSeq | XP_021864227.1 | something about silencing protein 10 isoform X3 [Spinacia oleracea] | 0 |
| Q8L3P4 | Protein THALLO OS=Arabidopsis thaliana OX=3702 GN=THAL PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8ZMA2 | Sas10 domain-containing protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB01g002530.2N |
| Portulacaceae | Portulaca oleracea | 6 | evm.TU.LG06.756, evm.TU.LG11.537, evm.TU.LG13.1229 ... |