Basic Information
Locus ID:
evm.TU.LG06.740
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 7071190 | 7072529 | + | evm.TU.LG06.740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 40,510.87 Da | 33.44 | 107.97 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 96 | 153 | 2.1E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 68 | 5.9E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 374 | 3.23E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 282 | 374 | 4.0E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 281 | 1.3E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 184 | 1.3E-44 | IPR032675 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 121 | 134 | 8.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 359 | 372 | 8.7E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24240.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_006434422.1 | LRR receptor-like serine/threonine-protein kinase RCH1 [Citrus clementina] | 0 |
| Q9LHP4 | LRR receptor-like serine/threonine-protein kinase RGI1 OS=Arabidopsis thaliana OX=3702 GN=RGI1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5NI76 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_047450 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000040486 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.740 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb0G37486, Lb3G20571 |
| Salicaceae | Populus euphratica | 1 | populus_peu34874 |